Examples

Here you will find datasets generated in the Rajewsky lab @ MDC Berlin leveraging the Open-ST workflow (experimental and computational).

Datasets

We provide raw data, instructions on how to reproduce the preprocessing pipeline, the corresponding preprocessed data (for comparison), and notebooks for some exploratory visualization and downstream analysis. We publicly provide mouse datasets, showcased in the paper.

• Adult mouse hippocampus
• E13 mouse head
• Human HNSCC, healthy and metastatic lymph node